Homemade Smoky Chipotle Salsa: Easy, Authentic & Flavorful Mexican Recipe
Discover how to make the ultimate homemade Smoky Chipotle Salsa! This easy recipe perfectly blends the bold heat of chipotle peppers in adobo sauce with the sweet tang of fresh tomatoes. In just minutes, you can create a versatile Mexican condiment bursting with authentic, spicy flavors, ideal for breakfast, tacos, grilled meats, or as a vibrant dip.

There are some flavors that instantly transport you back to childhood, and for me, a rich and smoky salsa de chile chipotle is one of them. Growing up, this vibrant salsa was an absolute staple on our family table, especially whenever we enjoyed a hearty breakfast of Molletes Mexicanos. To this very day, the thought of making molletes without this delicious, smoky Mexican salsa feels incomplete.
This beloved salsa is more than just a recipe; it’s a culinary legacy, a treasured gift passed down through generations. My Abuelita Maria shared it with my mom, and now it’s a staple in my kitchen, bringing warmth and flavor to countless meals. It’s incredibly simple to prepare, yet its taste is profoundly complex and satisfying. While it’s the perfect companion for molletes, its versatility extends to a wide array of other dishes, adding a delightful kick and depth of flavor wherever it goes.
If you appreciate the unique flavor of chipotle chiles, you’ll also love our recipes for Albóndigas in Chipotle Sauce or Sopa de Tortilla Azteca.
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Understanding Chipotle Peppers: The Heart of the Salsa
To truly appreciate this salsa, it’s worth understanding its star ingredient: the chipotle pepper. Chipotle peppers are essentially mature jalapeño peppers that have undergone a fascinating transformation through a smoking and drying process. The very name “chipotle” hails from the Nahuatl word “chilpoctli,” which translates to “smoked chili,” perfectly describing its essence.
During this traditional process, fresh, vibrant jalapeños slowly become dry, small, and beautifully wrinkled. More importantly, their flavor profile evolves dramatically, deepening into a rich, earthy, and distinctly smoky taste that is completely unique. This smoky, spicy character makes chipotles a highly prized and popular ingredient in many authentic Mexican dishes, lending a depth that cannot be replicated by other chilies.
Chipotles in Adobo Sauce: A Flavorful Shortcut
Our recipe today harnesses the convenience and concentrated flavor of chipotles in adobo sauce. These are typically canned chipotle peppers immersed in a luscious, tangy sauce made from a blend of vinegar, various spices, and a touch of tomato paste. This adobo sauce serves a dual purpose: it not only acts as a preservative for the peppers but also infuses them with an additional layer of tangy, slightly sweet, and fiery flavor that is absolutely essential for our salsa.
The good news is that chipotle peppers in adobo sauce are incredibly accessible. You can easily find them in the Latin American aisle of most major grocery stores or even purchase them online. Always keep a can or two in your pantry; they’re a secret weapon for adding instant depth and authentic Mexican flavor to a variety of meals.
Why This Homemade Chipotle Salsa Will Become Your Go-To
This isn’t just another salsa recipe; it’s a gateway to incredible flavor with minimal effort. Here’s why you’ll find yourself making this Smoky Chipotle Salsa again and again:
- Effortless Preparation with Minimal Ingredients: You’ll be amazed at how much flavor can come from just 6 simple, readily available ingredients. No exotic spices or complicated techniques are required, making this a perfect recipe for any home cook.
- Incredibly Easy to Make: The process couldn’t be simpler. The only cooking involved is a quick boil of two fresh tomatoes. After that, it’s just a matter of blending those softened tomatoes with the remaining ingredients, a quick simmer, and your delicious salsa is ready to serve in under 15 minutes!
- Unforgettable Amazing Flavor: This salsa strikes a perfect balance. It expertly combines the deep, irresistible smokiness of chipotle peppers with a delightful hint of sweetness and acidity from ripe tomatoes. The subtle garlic and salt enhance these core flavors, creating a complex and satisfying taste experience.
- Fully Customizable to Your Palate: Whether you prefer a gentle warmth or a fiery kick, this recipe is easily adaptable. You have complete control over the spice level, allowing you to tailor it perfectly to your preference. We provide clear tips on how to make it spicier or milder.
- Remarkably Versatile: This salsa is far more than just a dip. It’s a true workhorse in the kitchen! Enjoy it with traditional Mexican dishes like tacos and burritos, use it to elevate your breakfast eggs, spoon it over grilled meats, or simply serve it with tortilla chips for a crowd-pleasing appetizer. Explore more serving suggestions in the dedicated “How to Serve” section below.
Essential Ingredients & Smart Substitutions
Crafting the perfect Smoky Chipotle Salsa starts with selecting the right ingredients. Here’s a closer look at what you’ll need and how each component contributes to the final masterpiece, along with some helpful substitution ideas.

- Chipotles in Adobo Sauce: These are the undisputed stars of the show, delivering that signature smoky heat. The beauty of using chipotles in adobo is the control it gives you over the heat level. For a milder salsa, focus on using more of the rich adobo sauce and fewer actual pepper pieces. For a bolder, spicier kick, include more of the whole chipotles. Remember to roughly chop them before blending if you prefer a smoother texture without large pieces.
- Tomatoes: We highly recommend using Roma tomatoes for this recipe. Their firm flesh, lower water content, and balanced sweet-tart flavor make them a staple in Mexican cooking, providing the perfect base for our salsa. When selecting, choose ripe tomatoes that are firm to the touch but yield slightly when gently squeezed. If Roma tomatoes aren’t available, any ripe, medium-sized garden tomatoes will work, though the flavor profile might vary slightly.
- Garlic Powder: A small but mighty addition! Just a quarter teaspoon of garlic powder infuses the salsa with a savory, zesty undertone that complements the smoky chipotles without overpowering the other flavors. It’s a convenient way to add a consistent garlic note.
- Salt: A touch of kosher salt is essential to enhance and balance all the flavors in the salsa. Always start with the recommended amount and remember to taste and adjust at the end. Different palates have different preferences, so don’t be afraid to add a pinch more if needed.
- Water: A modest amount of water is crucial for achieving the perfect consistency. It helps the ingredients blend smoothly into a uniform sauce without making the salsa too watery or thin. It also aids in creating a silky texture.
- Oil: The final step, sautéing the salsa in a little bit of neutral-flavored oil, is a game-changer. This brief cooking process deepens the flavors, making them “marry” together beautifully and adding a wonderful richness. Opt for a neutral oil like avocado oil, or a mild-tasting olive oil that won’t compete with the salsa’s robust flavors.
Handy Substitutions to Keep in Mind
- For an alternative tomato flavor: Instead of boiling fresh tomatoes, you can use canned fire-roasted tomatoes. This will introduce an additional layer of smoky depth and a slightly different sweet profile. Adjust salt as canned varieties can vary in sodium content.
- For a bolder garlic presence: If you’re a garlic lover and prefer a more pungent flavor, feel free to substitute the garlic powder with one small clove of fresh garlic. Peel and roughly chop it before adding it to the blender with the other ingredients.
See the recipe card below for exact quantities and detailed instructions.
Crafting Your Homemade Salsa de Chipotle: A Step-by-Step Guide
Making this authentic Smoky Chipotle Salsa is surprisingly straightforward. Follow these simple steps to bring this flavorful Mexican condiment to your table.



1. Boil Tomatoes: Place two whole Roma tomatoes in a small saucepan and cover them with water. Bring to a boil and cook until the tomatoes are visibly softened and fork-tender, usually about 8-10 minutes. This step softens the tomatoes and makes them easier to blend, contributing to a smoother salsa.
2. Blend All Ingredients: Carefully transfer the cooked tomatoes (no need to peel them) to a blender or food processor. Add the chipotle peppers (adjusting quantity for desired heat), the adobo sauce from the can, garlic powder, salt, and the specified amount of water. Blend everything together until the mixture is completely smooth and uniform in consistency. Scrape down the sides if necessary to ensure all ingredients are well incorporated.
3. Cook the Salsa: In the same (or a clean) small saucepan, heat 1 tablespoon of a neutral oil (like avocado or mild olive oil) over medium-low heat. Once the oil is hot and shimmering, carefully pour the blended salsa mixture into the pan. Be cautious as it might splatter slightly. Allow the salsa to simmer gently for about 2-3 minutes, stirring occasionally. This simmering step is crucial as it allows the flavors to meld and deepen, transforming the fresh blend into a more complex and integrated sauce.
4. Adjust Seasoning & Serve: After simmering, taste the salsa. This is your chance to adjust the salt to your preference. If it needs more kick, you can add a tiny bit more chipotle adobo. Once seasoned to perfection, your delicious Smoky Chipotle Salsa is ready to be served warm!
Inspiring Ways to Serve Your Smoky Chipotle Salsa
As I mentioned, in my home, this chipotle salsa is an inseparable partner to molletes. Their combination is truly a match made in heaven! However, the versatility of this salsa means it shines beautifully on a multitude of other dishes. Its smoky, spicy, and tangy notes can elevate almost any meal:
- Breakfast Power-Up: Drizzle it generously over Huevos con Tortilla, a classic egg scramble with tortillas, or use it to add a kick to Papas con Huevo (potato and egg scramble). It’s also fantastic with plain scrambled eggs, omelets, or breakfast burritos.
- Enhance Your Mains: Serve it as a side for grilled chicken, steak, or fish. Its bold flavor cuts through richness and adds a vibrant dimension.
- Taco & Flauta Perfection: It’s a natural fit for any type of taco, from carne asada to vegetarian options. It’s also incredible with crispy Pork Flautas or Chicken Flautas.
- Bean Booster: A spoonful transforms simple beans! Add it to a bowl of Simple Instant Pot Pinto Beans for an extra layer of flavor.
- Soup Savior: Stir a dollop into a bowl of your favorite Mexican soup, like Caldo de Albóndigas (Mexican Meatball Soup) or Gluten-Free Mexican Fideo Soup, for an added depth and warmth.
- Quick & Easy Appetizer: Of course, it’s always a hit served simply with a basket of warm tortilla chips!
- Marinade or Sauce Base: Thin it out slightly and use it as a quick marinade for chicken or pork, or as a flavorful base for stews.
Storage and Reheating Tips for Freshness
To ensure your delicious salsa stays fresh and flavorful:
Store any leftover Smoky Chipotle Salsa in an air-tight container in the refrigerator for approximately 3-5 days. For longer preservation, this salsa freezes beautifully for up to 3 months. To freeze, divide into smaller, freezer-safe portions or ice cube trays, then transfer to a freezer bag once solid. Thaw in the refrigerator overnight before reheating.
This salsa truly shines when served warm, as the warmth helps to bring out its full spectrum of flavors. To reheat, simply place your desired portion in a microwave-safe bowl, cover with a paper towel to prevent splattering, and microwave for 50-60 seconds, or until heated through. Alternatively, you can reheat it gently in a small saucepan on the stove over low heat, stirring occasionally, without the need for additional oil.
Expert Tips & Creative Variations for Your Salsa
Here are some valuable tips and variations to help you master this Smoky Chipotle Salsa and customize it to your exact preferences:
- To Consistently Increase the Amount of Salsa: The provided recipe is carefully balanced to achieve the best flavor profile with equal proportions of the main ingredients. If you wish to make a larger batch while maintaining that perfect balance, simply follow this easy ratio:
- For every 1 medium Roma tomato, use 1 chipotle pepper, 1 teaspoon of adobo sauce, and 2 tablespoons of water. Adjust the salt and garlic powder proportionally to taste. This ensures a consistent, delicious flavor every time, regardless of batch size.
- For a Spicier Salsa: If you crave more heat, it’s easy to dial it up. Start by using 2 tomatoes (as in the original recipe) and increase the number of chipotle peppers to 3 or even 4, along with their adobo sauce. You can also add a pinch of dried red pepper flakes or a small fresh serrano pepper to the blender for an extra layer of heat.
- For a Milder Salsa: If you prefer a gentler warmth, reduce the chipotle intensity. Use 2 tomatoes as a base, but incorporate only 1 chipotle pepper, or even just half a chipotle, along with 2-3 teaspoons of its flavorful adobo sauce. The adobo sauce carries much of the smoky flavor without as much direct heat from the pepper flesh.
- Making it Gluten-Free: This salsa is naturally gluten-free, provided that the chipotle peppers in adobo sauce you use do not contain gluten. It’s always a good practice to double-check the ingredient label on the can, as some brands might include thickening agents like flour.
- Achieving the Perfect Texture: If you prefer a chunkier salsa, blend for a shorter amount of time. For a super smooth, restaurant-style salsa, blend until absolutely no visible pieces remain.
- Balancing Flavors: If your salsa tastes a bit flat, it likely needs more salt. If it’s too spicy, a tiny pinch of sugar or a bit more fresh tomato can help to balance the heat. A squeeze of lime juice at the end can also brighten all the flavors.
Frequently Asked Questions About Chipotle Salsa
While you certainly *can* use canned tomatoes (drained, fire-roasted or plain), we highly recommend sticking to fresh Roma tomatoes for the best flavor. Fresh tomatoes lend a brighter, more natural sweetness and acidity. Canned tomatoes often have a different sweetness profile and sometimes a metallic undertone, which can alter the intended authentic taste of the final salsa. If you must use canned, fire-roasted diced tomatoes are the best alternative.
While simply blending the ingredients alone will give you a delicious raw salsa, simmering it briefly is a step we strongly recommend and include in the recipe. Cooking the salsa on the stove for a few minutes does two important things: it intensifies and melds all the flavors together, creating a more cohesive and rich taste, and it thickens the salsa slightly, giving it a more desirable texture. It truly enhances the depth of the finished product, making it taste more authentic and restaurant-quality.
Don’t let those leftover chipotles go to waste! Once opened, transfer any unused chipotle peppers and the remaining adobo sauce to an airtight container. They’ll keep well in the refrigerator for several weeks, or you can freeze them for up to 6 months. To make them easier to use later, you can even chop them up and freeze them in small portions in an ice cube tray. Leftover chipotles are fantastic in numerous dishes: blend them into marinades for chicken or pork, stir them into chili or stews for smoky depth, add them to creamy sauces for a spicy kick (like our Albondigas in Chipotle Sauce), or even mix them into mayonnaise for a zesty sandwich spread.
I truly hope you enjoy making and savoring this incredible Smoky Chipotle Salsa as much as my family and I do! If you try this recipe, please leave me a commentwith a star rating below. Your feedback means a lot! Also, be sure to follow me on Instagram, Facebook or Pinterest to stay in touch with more delicious Latin American recipes. And don’t forget to subscribe to my newsletter for exclusive content and updates!

Recipe Card: Smoky Chipotle Salsa

Smoky Chipotle Salsa
by Gemma Aguayo-Murphy
Pin Recipe
Equipment
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Blender or food processor
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Saucepan
Ingredients
- 2 medium Roma tomatoes
- 2 chipotle peppers in adobo sauce
- 2 teaspoon adobo sauce from the chipotle peppers
- ¼ teaspoon garlic powder
- ¼ teaspoon salt (plus more to taste)
- 4 tablespoon water
- 1 tablespoon olive oil (or other neutral oil)
Instructions
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Boil the tomatoes in water until fork-tender (about 8-10 minutes).
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Add the cooked tomatoes (no need to peel) to a blender or food processor along with the chipotle peppers, the 2 teaspoons of adobo sauce, garlic powder, salt, and water.
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Blend everything together until smooth.
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In a small saucepan, heat the olive oil on medium-low heat. Once hot, carefully pour the blended sauce into the pan.
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Simmer for about 2-3 minutes, stirring occasionally.
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Taste for seasoning and adjust salt as needed.
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Serve warm and enjoy!
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Store any leftovers in the refrigerator in an air-tight container for 3-5 days, or freeze for up to 3 months.
Notes
- To Increase the Amount of Salsa Without Sacrificing Flavor: The original recipe I have provided has equal proportions of the main ingredients for the best flavor. So if you want to increase the amount of salsa and keep the flavor consistent, follow this rule:
- For every 1 tomato, use 1 chipotle pepper, 1 teaspoon of adobo sauce and 2 tablespoons of water. Adjust the salt and garlic powder accordingly.
- For a Spicier Salsa: Use 2 tomatoes and increase the chipotles to 3 or 4. You can also add a fresh serrano pepper to the blender.
- For a Mild Salsa: Use 2 tomatoes and only 1 chipotle or half of a chipotle with more of the adobo sauce for smokiness without excessive heat.
- This salsa is best served warm to fully appreciate its complex flavors.
- You can substitute garlic powder with one small clove of fresh garlic for a bolder flavor.
Nutrition
Originally published April 29, 2020. Updated post and photos August 2024.